BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036B04LP1|AL430172
(962 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig832 1899 0.0
>3x_Contig832
Length = 3863
Score = 1899 bits (958), Expect = 0.0
Identities = 961/962 (99%)
Strand = Plus / Minus
Query: 1 tataaactttaccatcagcttacatcaaaaccaataagagaaaacccattgaaggaccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2627 tataaactttaccatcagcttacatcaaaaccaataagagaaaacccattgaaggaccca 2568
Query: 61 ataaatttccatatccattgcatcctgatgggaacaaactcgcacggtgtctaactgatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2567 ataaatttccatatccattgcatcctgatgggaacaaactcgcacggtgtctaactgatg 2508
Query: 121 atgagacttctgtaggaatccaaagaaaaacctgacattgtatggattagtgcatgatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2507 atgagacttctgtaggaatccaaagaaaaacctgacattgtatggattagtgcatgatgt 2448
Query: 181 cgggcttctggtaattggaccaactcttgatgttttaggacgccgggctattggcttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2447 cgggcttctggtaattggaccaactcttgatgttttaggacgccgggctattggcttctt 2388
Query: 241 gtattcactctttctttgtgcacaaacttcctagcttccagttttccctcgagcttatcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2387 gtattcactctttctttgtgcacaaacttcctagcttccagttttccctcgagcttatcc 2328
Query: 301 aggcggattccacaaattgtccccccaacatcttttttttttcagaaacatttttctttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2327 aggcggattccacaaattgtccccccaacatcttttttttttcagaaacatttttctttt 2268
Query: 361 cgttcctgtacttccatcatgagtgagtgaactgaaaaactggagctaaacagatggcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2267 cgttcctgtacttccatcatgagtgagtgaactgaaaaactggagctaaacagatggcaa 2208
Query: 421 tggaattcgaacaaggtgacgacaaaaattgctaacggatcatagtatattctatgaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2207 tggaattcgaacaaggtgacgacaaaaattgctaacggatcatagtatattctatgaaag 2148
Query: 481 tgcttcaatcagttgggataggaacgaacgcaggattgcgaaaaccgttattgttgaatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2147 tgcttcaatcagttgggataggaacgaacgcaggattgcgaaaaccgttattgttgaatc 2088
Query: 541 ttgtcacgtgatagggatatcactatttttttaacttttggctctcagagtggaccgggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2087 ttgtcacgtgatagggatatcactatttttttaacttttggctctcagagtggaccgggt 2028
Query: 601 acattttttttgacactttctgtcgctaagccaactacagtccacgatggtattataaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2027 acattttttttgacactttctgtcgctaagccaactacagtccacgatggtattataaat 1968
Query: 661 cacgtgtgttacttaaggatgagaatagttgaacaagatatgcatgaatagtggatttta 720
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1967 cacgtgtgtaacttaaggatgagaatagttgaacaagatatgcatgaatagtggatttta 1908
Query: 721 cggtgaactggatgatgtagaaaagacctgaagtattaatttacatatgaataagtttac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1907 cggtgaactggatgatgtagaaaagacctgaagtattaatttacatatgaataagtttac 1848
Query: 781 tactggagtgttaacaaaaaaaggtataatacgatttataaacaattggtttctctatct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1847 tactggagtgttaacaaaaaaaggtataatacgatttataaacaattggtttctctatct 1788
Query: 841 tagaataaccattccaagattttttcccagaggtttcttggtgggatacgtctagcattc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1787 tagaataaccattccaagattttttcccagaggtttcttggtgggatacgtctagcattc 1728
Query: 901 aattccttggtttcttcttcgatttctcttagacccgtagtgacatcgatttcggacact 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1727 aattccttggtttcttcttcgatttctcttagacccgtagtgacatcgatttcggacact 1668
Query: 961 ga 962
||
Sbjct: 1667 ga 1666
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9371
Number of Sequences: 1807
Number of extensions: 9371
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 962
length of database: 10,358,551
effective HSP length: 16
effective length of query: 946
effective length of database: 10,329,639
effective search space: 9771838494
effective search space used: 9771838494
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)